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Publications by Author

Mark Beaumont

Mcheza: A workbench to detect selection using dominant markers (2011)
Antao, T., and M. A. Beaumont
Bioinformatics vol: 27
DOI: 10.1093/bioinformatics/btr253
Adaptive divergence and speciation among sexual and pseudoviviparous populations of Festuca (2011)
Chiurugwi, T., M. A. Beaumont, M. J. Wilkinson, and N. H. Battey
Heredity vol: 106 , Pages: 854 - 861
Multiple approaches to detect outliers in a genome scan for selection in ocellated lizards (Lacerta lepida) along an environmental gradient (2011)
Nunes, V. L., M. A. Beaumont, R. K. Butlin, and O. S. Paulo
Molecular Ecology vol: 20 , Pages: 193 - 205
Likelihood-Free Inference of Population Structure and Local Adaptation in a Bayesian Hierarchical Model. (2010)
Bazin, E., K. J. Dawson, and M. A. Beaumont
Genetics vol: 185 , Pages: 587 - 602
Approximate Bayesian computation in evolution and ecology (2010)
Beamont, M.A.
Annual Review of Ecology, Evolution, and Systematics vol: 41 , Pages: 379 - 406
In defence of model-based inference in phylogeography REPLY. (2010)
Beaumont, M. A., R. Nielsen, C. Robert, J. Hey, O. Gaggiotti, L. Knowles, A. Estoup, M. Panchal, J. Corander, M. Hickerson, S. A. Sisson, N. Fagundes, L. Chikhi, P. Beerli, R. Vitalis, J. M. Cornuet, J. Huelsenbeck, M. Foll, Z. H. Yang, F. Rousset, D. Bal
Molecular Ecology vol: 19 , Pages: 436 - 446
The Confounding Effects of Population Structure, Genetic Diversity and the Sampling Scheme on the Detection and Quantification of Population Size Changes. (2010)
Chikhi, L., V. C. Sousa, P. Luisi, B. Goossens, and M. A. Beaumont
Genetics vol: 186 , Pages: 983 - 995
Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus. (2010)
Estoup, A., S. J. E. Baird, N. Ray, M. Currat, J. M. Cornuet, F. Santos, M. A. Beaumont, and L. Excoffier.
Molecular Ecology Resources vol: 10 , Pages: 886 - 901
Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data. (2010)
Guillemaud, T., M. A. Beaumont, M. Ciosi, J. M. Cornuet, and A. Estoup.
Heredity vol: 104 , Pages: 88 - 99
Saving Darwin's muse: evolutionary genetics for the recovery of the Floreana mockingbird. (2010)
Hoeck, P. E. A., M. A. Beaumont, K. E. James, R. B. Grant, P. R. Grant, and L. F. Keller.
biology letters vol: 6 , Pages: 212 - 215
ABC: A useful Bayesian tool for the analysis of population data. (2010)
Lopes, J. S., and M. A. Beaumont.
Infection Genetics and Evolution vol: 10 , Pages: 826 - 833
Evaluating Nested Clade Phylogeographic Analysis under Models of Restricted Gene Flow (2010)
Panchal, M., and M. A. Beaumont.
Systematic Biology vol: 59 , Pages: 415 - 432
Adaptive approximate Bayesian computation (2009)
Beaumont, M. A., J. M. Cornuet, J. M. Marin, and C. P. Robert
Biometrika vol: 96 , Pages: 983 - 990
A novel parallel approach to the likelihood-based estimation of admixture in population genetics. (2009)
Giovannini, A., G. Zanghirati, M. A. Beaumont, L. Chikhi, and G. Barbujani.
Bioinformatics vol: 25 , Pages: 1440 - 1441
The Origins of Lactase Persistence in Europe (2009)
Itan, Y., A. Powell, M. A. Beaumont, J. Burger, and M. G. Thomas
PLoS Computational Biology vol: 5
PopABC: a program to infer historical demographic parameters (2009)
Lopes, J. S., D. Balding, and M. A. Beaumont
Bioinformatics vol: 25 , Pages: 2747 - 2749
Statistical inferences in phylogeography (2009)
Nielsen, R., and M. A. Beaumont
Molecular Ecology vol: 18 , Pages: 1034 - 1047
Rapid radiation in spiny lobsters (Palinurus spp) as revealed by classic and ABC methods using mtDNA and microsatellite data (2009)
Palero, F., J. Lopes, P. Abello, E. Macpherson, M. Pascual, and M. A. Beaumont
BMC Evolutionary Biology vol: 9
Approximate Bayesian Computation Without Summary Statistics: The Case of Admixture. (2009)
Sousa, V. C., M. Fritz, M. A. Beaumont, and L. Chikhi
Genetics vol: 181 , Pages: 1507 - 1519
Selection and sticklebacks. (2008)
Beaumont, M. A.
Molecular Ecology vol: 17 , Pages: 3425 - 3427
On the validity of nested clade phylogeographical analysis. (2008)
Beaumont, M. A., and M. Panchal
Molecular Ecology vol: 17 , Pages: 2563 - 2565
Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation (2008)
Cornuet, J. M., F. Santos, M. A. Beaumont, C. P. Robert, J. M. Marin, D. J. Balding, T. Guillemaud, and A. Estoup.
Bioinformatics vol: 24 , Pages: 2713 - 2719
An approximate Bayesian computation approach to overcome biases that arise when using amplified fragment length polymorphism markers to study population structure. (2008)
Foll, M., M. A. Beaumont, and O. Gaggiotti.
Genetics vol: 179 , Pages: 927 - 939
ONeSAMP: a program to estimate effective population size using approximate Bayesian computation (2008)
Tallmon, D. A., A. Koyuk, G. Luikart, and M. A. Beaumont
Molecular Ecology Resources vol: 8 , Pages: 299 - 301
Novel high-resolution characterization of ancient DNA reveals C > U-type base modification events as the sole cause of post mortem miscoding lesions. (2007)
Brotherton, P., P. Endicott, J. J. Sanchez, M. Beaumont, R. Barnett, J. Austin, and A. Cooper.
Nucleic Acids Research vol: 35 , Pages: 5717 - 5728
Stocking may increase mitochondrial DNA diversity but fails to halt the decline of endangered Atlantic salmon populations (2007)
Ciborowski, K. L., S. Consuegra, C. G. de Leaniz, J. Wang, M. A. Beaumont, and W. C. Jordan.
Conservation Genetics vol: 8 , Pages: 1355 - 1367
Rare and fleeting: an example of interspecific recombination in animal mitochondrial DNA. (2007)
Ciborowski, K. L., S. Consuegra, C. G. de Leaniz, M. A. Beaumont, J. L. Wang, and W. C. Jordan.
Biology Letters vol: 3 , Pages: 554 - 557
A note on the accuracy of PAC-likelihood inference with microsatellite data (2007)
Cornuet, J. M., and M. A. Beaumont
Theoretical Population Biology vol: 71 , Pages: 12 - 19
Statistical evaluation of alternative models of human evolution (2007)
Fagundes, N. J. R., N. Ray, M. Beaumont, S. Neuenschwander, F. M. Salzano, S. L. Bonatto, and L. Excoffier
Proceedings of the National Academy of Sciences, USA vol: 104 , Pages: 17614 - 17619
The automation and evaluation of nested clade phylogeographic analysis. (2007)
Panchal, M., and M. A. Beaumont
Evolution vol: 61 , Pages: 1466 - 1480
Inference on microsatellite mutation processes in the invasive mite, Varroa destructor, using reversible jump Markov chain Monte Carlo (2006)
Cornuet, J. M., M. A. Beaumont, A. Estoup, and M. Solignac
Theoretical Population Biology vol: 69 , Pages: 129 - 144
Geographical variation in the clouded leopard, Neofelis nebulosa, reveals two species. (2006)
Kitchener, A. C., M. A. Beaumont, and D. Richardson
Current Biology vol: 16 , Pages: 2377 - 2383